Bayesian spatial models for estimating means of sampled and non-sampled small areas
Section 5. Application to the Current Population Survey data
In this section, we evaluate the spatial models in terms
of their prediction accuracy for some state-level population median incomes.
The U.S. Department of Health and Human Service (HHS) annually needed accurate
data for median incomes for states to implement a welfare program. While
accurate national median income data are available from the Current Population
Survey (CPS), the CPS data do not provide accurate state-level median income
data. To supply accurate statistics to the HHS, the U.S. Census Bureau
considered model-based small area estimation methods by utilizing auxiliary
data from other federal programs. We apply proposed spatial models to estimate
1989 four-person family median incomes for the contiguous forty-nine U.S.
states, including the District of Columbia. We use the direct estimates of 1990
CPS and compare our predictions with the more reliable statistics from the long
form from the 1990 Census, i.e., we consider the statistics from the long
form from the 1990 Census as the true values. Prediction performances are
measured using all small areas and a subset of areas after leaving out multiple
direct estimates.
5.1 Four-person family median income estimation
Let be the true four-person family median income
of the state for the year 1989, where The states of Alaska and Hawaii are excluded
as they are not geographically connected to the mainland. Let be the direct estimate of from the 1990 CPS. The covariates of interest
are 1980 Census median income and an adjusted 1980 Census median income .
The adjusted Census median income is defined as where and are the 1979 and 1989 per capita incomes of
the state provided by the Bureau of Economic
Analysis of the U.S. Department of Commerce. It has been known that the
adjusted Census median income is a good covariate which very effectively
accounts for the variability of the small area median income.
With the noninformative prior (2.14) with we fit all five models as described by
(2.8)-(2.10) with and where for the second covariate setting, we
exclude the adjusted Census median income from the fitted model. For each model
considered, we run 4 parallel HMC chains for 2,500 iterations after 5,000
burn-in iterations using rstan (Stan Development Team, 2018). We
retain every iteration and concatenate the 4 chains to
obtain a posterior sample of size 10,000. For all models and parameters,
the potential scale reduction factors Gelman
and Rubin, 1992) are all one indicating no lack of convergence. The
potential scale reduction factors are provided in Figure 5.1 and
Table 5.1.
Using the posterior means, we calculate the squared prediction errors
from respective and obtain the mean squared prediction error
(MSPE), defined in Section 4, by averaging the squared deviations. The average posterior
standard deviations (APSD) associated with are used to quantify the uncertainty of
predictions, and the widely applicable information criterion (WAIC; Watanabe and Opper, 2010) is used to
evaluate and compare the models, where a smaller WAIC value indicates a better
model fit.

Description of Figure 5.1
Figure presenting the histogram by model (FH, SAR, SCAR, CAR and LCAR) of potential scale reduction factors
(Rhat) of all parameters when no non-sampled area exists. We notice that for each model, all values of
are practically one indicating no evidence of lack of convergence.
Table 5.1
The potential scale reduction factor
of the hyperparameter
and
and corresponding 95% upper confidence limit for the dataset with no non-sampled area
Table summary
This table displays the results of The potential scale reduction factor
of the hyperparameter
and
and corresponding 95% upper confidence limit for the dataset with no non-sampled area. The information is grouped by Hyperparameter (appearing as row headers), Covariate included and Potential scale reduction factor (upper 95% confidence limit) (appearing as column headers).
| Hyperparameter |
Covariate included |
Potential scale reduction factor (upper 95% confidence limit) |
| FH |
SAR |
SCAR |
CAR |
LCAR |
|
|
|
0.995 (1.017) |
0.987 (1.010) |
0.995 (1.018) |
0.985 (1.007) |
1.008 (1.031) |
|
|
0.993 (1.015) |
0.991 (1.012) |
0.999 (1.022) |
0.987 (1.009) |
0.987 (1.01) |
|
|
|
– |
1.005 (1.028) |
0.997 (1.023) |
0.998 (1.036) |
0.994 (1.017) |
|
|
– |
1.005 (1.025) |
0.997 (1.016) |
0.998 (1.017) |
1.019 (1.039) |
Table 5.2
summarizes various evaluation measures we considered and the respective
percentage improvements (PI) of MSPE, APSD. When both covariates are available,
the LCAR model has approximately 14% smaller MSPE and 4% smaller APSD than the
independent FH model. In terms of MSPE, the second best performing model is the
SAR having approximately 9.5% smaller MSPE. When only (week covariate) is included in the fitted
model, the SAR model has approximately 40% smaller MSPE and 14% smaller APSD
than the independent FH model. The CAR and LCAR models show competitive
performances having approximately 36% smaller MSPE and 13% smaller APSD over
the independent FH model. By removing the strong covariate from the full model, the MSPE of the SAR and
LCAR models increase approximately 66% and 84%, respectively, whereas the MSPE
of the independent FH model increases more than 150%.
Table 5.2
Mean squared prediction error, average posterior standard deviation, and respective percentage improvements (PI) of spatial models over the independent FH model
Table summary
This table displays the results of Mean squared prediction error. The information is grouped by Covariate Included (appearing as row headers), ,
(appearing as column headers).
| Covariate Included |
|
|
| MSPE |
MSPE-PI |
APSD |
APSD-PI |
WAIC |
MSPE |
MSPE-PI |
APSD |
APSD-PI |
WAIC |
| FH |
2.88 |
– |
1.93 |
– |
259.06 (7.13) |
7.27 |
– |
2.31 |
– |
267.75 (8.44) |
| SAR |
2.61 |
9.55% |
1.94 |
0.34% |
261.46 (7.47) |
4.34 |
40.22% |
1.98 |
14.25% |
265.76 (8.16) |
| SCAR |
3.03 |
-5.14% |
1.95 |
-0.91% |
259.37 (7.01) |
5.62 |
22.62% |
2.22 |
3.52% |
263.41 (7.29) |
| CAR |
2.64 |
8.47% |
1.91 |
1.24% |
261.61 (7.86) |
4.62 |
36.35% |
2.01 |
12.97% |
263.32 (7.96) |
| LCAR |
2.47 |
14.50% |
1.85 |
4.19% |
261.79 (8.01) |
4.54 |
37.51% |
1.97 |
14.36% |
263.35 (8.08) |
In
terms of the goodness of fit, the independent FH model shows the best fit (the
smallest WAIC) when both covariates are included. Conversely, when only (week covariate) is included in the fitted
model, the independent FH model shows the worst fit having the largest WAIC
value. However, considering the standard errors given in parentheses, there is
no significant difference in the model fit.
Table 5.3
summarizes the posterior distributions of in terms of the posterior mean, mode, and
standard deviation. When all covariates are included in the fitted model, the
posterior distributions of indicate no strong spatial dependency having
posterior means centered around zero with large standard deviations. In
contrast, when only (week covariate) is included in the fitted
model, becomes very significant illustrating the
posterior distributions concentrated near the upper limit of its support.
In
summary, when the weak covariate does not adequately explain existing spatial
variation, the spatial models produce significantly better predictions
accounting for the spatial variation. When no substantial spatial variation
remains in the residual, they make marginally better predictions than the
independent FH model without sacrificing model fit.
Table 5.3
Posterior mean/mode (standard deviation) of
Table summary
This table displays the results of Posterior mean/mode (standard deviation) of
. The information is grouped by Covariate included, , (appearing as row headers), SAR, SCAR, CAR and LCAR (appearing as column headers).
| Covariate included |
SAR |
SCAR |
CAR |
LCAR |
|
|
0.10/0.40 (0.48) |
-0.06/0.04 (0.14) |
0.21/0.83 (0.55) |
0.57/0.80 (0.27) |
|
|
0.76/0.80 (0.14) |
0.14/0.17 (0.04) |
0.93/0.99 (0.09) |
0.85/0.97 (0.13) |
5.2 Estimation of some non-sampled state means
excluding their CPS values
In
this section, we evaluate the spatial models in terms of their prediction
accuracy for non-sampled small areas using the 1980 Census median income Specifically, we randomly exclude CPS
estimates (direct estimates) of multiple states at each instance and make
predictions for of the excluded states. As there are 49 small
areas (states), we created 12 datasets that lack direct estimates for or 5 areas, where is the number of non-sampled small areas as in
Section 2.2. Excluded states for each dataset are listed in
Table 5.4.
For
each dataset, we fit the independent FH model and four spatial models as
specified in (2.11)-(2.13) with the noninformative prior (2.13) with running HMC chains under the same setting as
in Section 5.1. The
values show no evidence of lack of
convergence, where detailed values are provided in Figure 5.2 and
Table 5.5. For each non-sampled area, the squared prediction error
and posterior standard deviation are obtained for each model. Based on these,
the prediction performance is compared with the following ratio: for and
where is the posterior standard deviation of under the model. A value of less than one indicates that the
spatial model has a smaller squared prediction
error (posterior standard deviation) than the independent FH model. In
Figures 5.3 and 5.4, we display the ratios using a red and blue color
scheme to denote ratios greater than and less than one, respectively, where a
darker color represents a more extreme value.
Overall, SAR, SCAR, CAR, and LCAR models exhibit smaller
SPEs in 35, 41, 36, and 36 states, respectively. The SCAR model has the
greatest number of states in which its predictions perform better than those of
the independent FH model, but the overall improvements are the least. In more
than 35 states, the SAR, CAR, and LCAR models produce more accurate predictions
than the independent FH model, and in three states (New Mexico, Oregon, and
Wisconsin), their SPEs are more than 100 times smaller. For California,
Minnesota, and South Carolina, all spatial models make worse predictions than
the independent FH model. California and Minnesota have much higher median
incomes than surrounding states, whilst South Carolina has a significantly
lower median income. Among the 49 states, these three states have the second,
seventh, and nineteenth smallest local Moran’s I values. This illustrates that
if the small area mean of an non-sampled area is significantly different from
the means of surrounding areas, then the spatial models may produce inferior
predictions. The model that demonstrates the best fit in terms of WAIC is
either the SCAR, CAR, or LCAR model, where the exact numbers are provided in
Table 5.4.
Table 5.4
States whose CPS estimates are excluded for each dataset and corresponding widely applicable information criterion (WAIC)
Table summary
This table displays the results of States whose CPS estimates are excluded for each dataset and corresponding widely applicable information criterion (WAIC). The information is grouped by Excluded states (appearing as row headers), FH, SAR, SCAR, CAR and LCAR (appearing as column headers).
| Excluded states |
FH |
SAR |
SCAR |
CAR |
LCAR |
| AZ MS OK SD |
246.15 (7.79) |
244.37 (7.50) |
241.71 (6.67) |
242.46 (7.50) |
242.21 (7.57) |
| AR CO DE TN |
245.79 (7.83) |
241.23 (7.69) |
241.05 (6.70) |
239.70 (7.61) |
239.85 (7.69) |
| MD MI NV WV |
246.06 (7.83) |
242.23 (7.58) |
241.34 (6.78) |
240.13 (7.32) |
240.02 (7.43) |
| MT NC NE NY |
248.91 (8.10) |
245.97 (9.51) |
243.85 (6.87) |
242.88 (8.34) |
242.40 (8.36) |
| DC GA ID ND |
245.07 (7.91) |
241.02 (6.61) |
240.09 (6.44) |
239.16 (6.75) |
239.48 (6.75) |
| AL MO VT WY |
245.57 (8.31) |
245.13 (7.67) |
242.74 (7.38) |
242.89 (7.65) |
243.36 (7.66) |
| FL LA UT WA |
247.38 (7.39) |
245.64 (7.29) |
243.08 (6.44) |
243.25 (7.20) |
243.48 (7.33) |
| MA MN SC TX |
248.32 (9.73) |
242.43 (8.95) |
244.75 (8.83) |
240.99 (8.69) |
240.34 (8.56) |
| KY RI VA WI |
243.86 (8.09) |
241.74 (7.06) |
240.05 (6.76) |
239.04 (6.91) |
238.87 (6.90) |
| IL IN NH PA |
244.69 (7.10) |
245.12 (7.41) |
243.31 (6.59) |
244.45 (7.60) |
244.39 (7.68) |
| CA ME NJ OH |
248.62 (8.54) |
244.06 (8.26) |
245.28 (7.68) |
242.00 (7.78) |
242.01 (7.90) |
| CT IA KS NM OR |
239.86 (7.95) |
239.81 (7.76) |
237.28 (7.29) |
237.78 (7.75) |
237.75 (7.60) |
Table 5.5
The potential scale reduction factor
of the hyperparameter
and
and corresponding 95% upper confidence limit for the 12 datasets with non-sampled areas
Table summary
This table displays the results of The potential scale reduction factor
of the hyperparameter
and
and corresponding 95% upper confidence limit for the 12 datasets with non-sampled areas Excluded states, FH, SAR, SCAR, CAR and LCAR (appearing as column headers).
|
Excluded states |
FH |
SAR |
SCAR |
CAR |
LCAR |
| Potential scale reduction factor (upper 95% confidence limit) of
|
AZ MS OK SD |
0.991 (1.013) |
1.012 (1.036) |
0.995 (1.017) |
1.005 (1.028) |
1.005 (1.030) |
| AR CO DE TN |
0.997 (1.019) |
1.010 (1.034) |
0.999 (1.023) |
0.985 (1.008) |
0.984 (1.007) |
| MD MI NV WV |
0.992 (1.015) |
1.007 (1.030) |
1.023 (1.047) |
1.001 (1.025) |
1.011 (1.035) |
| MT NC NE NY |
0.990 (1.012) |
0.984 (1.009) |
0.997 (1.020) |
0.999 (1.024) |
0.983 (1.006) |
| DC GA ID ND |
1.002 (1.024) |
1.007 (1.032) |
1.001 (1.024) |
1.011 (1.036) |
0.997 (1.020) |
| AL MO VT WY |
0.997 (1.019) |
1.006 (1.030) |
0.998 (1.021) |
1.002 (1.026) |
1.019 (1.045) |
| FL LA UT WA |
1.014 (1.037) |
1.005 (1.027) |
1.002 (1.025) |
0.999 (1.023) |
1.019 (1.043) |
| MA MN SC TX |
1.008 (1.031) |
1.001 (1.025) |
1.003 (1.025) |
0.994 (1.019) |
1.007 (1.032) |
| KY RI VA WI |
1.011 (1.034) |
1.005 (1.029) |
1.009 (1.033) |
0.989 (1.011) |
1.011 (1.035) |
| IL IN NH PA |
0.992 (1.013) |
1.018 (1.041) |
0.992 (1.013) |
0.989 (1.014) |
0.989 (1.012) |
| CA ME NJ OH |
1.002 (1.025) |
1.009 (1.033) |
1.001 (1.024) |
1.011 (1.035) |
1.003 (1.026) |
| CT IA KS NM OR |
0.997 (1.018) |
1.008 (1.032) |
1.007 (1.030) |
1.009 (1.034) |
1.012 (1.041) |
| Potential scale reduction factor (upper 95% confidence limit) of
|
AZ MS OK SD |
– |
1.005 (1.026) |
1.001 (1.029) |
1.004 (1.040) |
0.995 (1.018) |
| AR CO DE TN |
– |
1.019 (1.042) |
0.993 (1.018) |
1.000 (1.034) |
1.005 (1.028) |
| MD MI NV WV |
– |
1.005 (1.027) |
0.992 (1.017) |
0.988 (1.021) |
1.002 (1.026) |
| MT NC NE NY |
– |
1.001 (1.024) |
0.999 (1.030) |
0.986 (1.023) |
0.998 (1.023) |
| DC GA ID ND |
– |
0.999 (1.020) |
0.995 (1.024) |
0.991 (1.026) |
1.000 (1.024) |
| AL MO VT WY |
– |
1.003 (1.026) |
1.011 (1.037) |
0.989 (1.025) |
1.008 (1.031) |
| FL LA UT WA |
– |
1.004 (1.025) |
0.996 (1.026) |
1.000 (1.033) |
1.005 (1.029) |
| MA MN SC TX |
– |
1.002 (1.041) |
1.014 (1.045) |
0.984 (1.018) |
0.996 (1.02) |
| KY RI VA WI |
– |
1.010 (1.032) |
0.990 (1.016) |
0.993 (1.031) |
0.986 (1.009) |
| IL IN NH PA |
– |
1.030 (1.055) |
0.993 (1.016) |
0.994 (1.029) |
1.003 (1.025) |
| CA ME NJ OH |
– |
1.003 (1.026) |
0.997 (1.026) |
0.996 (1.032) |
0.989 (1.012) |
| CT IA KS NM OR |
– |
1.017 (1.040) |
0.997 (1.022) |
1.009 (1.044) |
0.981 (1.003) |

Description of Figure 5.2
Figure presenting the histogram by model SAR, SCAR, CAR and LCAR) of potential scale reduction factors
(Rhat) of all parameters when no non-sampled area exists. We notice that for each model, all values of
are practically one indicating no evidence of lack of convergence.

Description of Figure 5.3
Figure presenting the squared prediction error ratios for each model (SAR, SCAR, CAR and LCAR) compared to the independent FH model in each of the 49 states using a red and blue color scheme to denote ratios greater than and less than one, respectively, where a darker color represents a more extreme value. The SCAR model has the greatest number of states in which its predictions perform better than those of the independent FH model, but the overall improvements are the least (the states are less dark blue).

Description of Figure 5.4
Figure presenting the posterior standard deviation ratios for each model (SAR, SCAR, CAR and LCAR) compared to the independent FH model in each of the 49 states using a red and blue color scheme to denote ratios greater than and less than one, respectively, where a darker color represents a more extreme value.
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